share/pkg/star/2.7.0e/bin/STAR -genomeDir. test_results/G20P1sc-C05-res.temp" failed! Plase check if you provide correct parameters/options for the pipeline! This is the error part of the output Expression Results are written! This is my code for prefix in $(ls *.fastq.gz | rev | cut -c 12-| rev | uniq)
I am running on the same number of nodes as the threads requested.I am trying to map reads with rsem-calculate-expression using STAR aligner using a loop, however I am getting an error of the STARtemp folder not being deleted after the first run, hence it is stopping the next run.
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